Mothers Against Decapentaplegic Homolog 3

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-317   PRO-318  2.4 2.5 9.9 -0.8 54.9 53.3 67.4
 PRO-318   ASN-319  3.0 2.9 -10.3 20.0 99.8 109.3 -2.4
 ASN-319   CYS-320  2.8 2.7 -16.2 18.8 130.7 145.5 13.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-321   GLN-322  0.2 1.0 20.1 -4.2 117.2 109.4 -122.1
 GLN-322   ARG-323  3.7 4.2 -48.9 10.0 70.6 49.2 171.9
 ARG-323   TYR-324  4.9 5.0 -145.0 178.2 24.0 54.4 -269.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-343   ASN-344  4.9 5.3 -22.6 27.1 87.8 96.3 -26.6
 ASN-344   ASN-345  7.9 8.3 -18.6 -2.6 62.3 60.9 74.1
 ASN-345   GLN-346  9.5 9.7 33.5 -20.6 58.9 60.9 42.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-369   CYS-370  5.5 4.7 -5.6 14.4 136.4 140.0 76.7
 CYS-370   THR-371  4.0 3.5 -8.5 5.1 102.0 105.8 20.2
 THR-371   ILE-372  3.6 3.8 -26.2 15.2 41.1 40.6 99.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-401   GLY-402  3.7 3.9 -1.8 13.7 101.3 103.2 55.1
 GLY-402   PRO-403  7.1 7.1 -7.4 1.5 127.8 124.2 -39.6
 PRO-403   LEU-404  7.2 7.4 -9.9 8.6 66.0 66.9 -10.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees