Rubisco Operon Transcriptional Regulator

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-159   PRO-160  7.8 7.9 -5.6 -2.6 47.3 53.9 7.3
 PRO-160   PHE-161  4.3 4.3 -9.0 9.6 71.0 65.8 -2.6
 PHE-161   LEU-162  5.3 5.0 7.0 -18.4 122.3 117.9 35.9
 LEU-162   ASP-163  3.4 2.6 -1.9 12.8 100.5 101.1 -15.0
 ASP-163   ASN-164  3.2 2.8 0.3 -8.4 151.3 148.3 37.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-267   ARG-268  5.9 6.2 -11.3 11.4 96.2 105.4 4.8
 ARG-268   TRP-269  2.4 2.9 -20.7 22.0 114.0 127.2 -19.7
 TRP-269   TYR-270  3.1 3.3 -7.5 -4.6 50.7 52.3 26.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees