Solute-Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-124   GLY-125  7.5 7.5 8.6 -7.6 125.9 125.6 2.4
 GLY-125   VAL-126  3.8 3.9 12.9 6.9 49.5 54.0 30.4
 VAL-126   ASN-127  0.9 0.4 -14.5 -15.8 63.2 62.7 40.2
 ASN-127   VAL-128  3.2 3.4 17.9 -2.7 55.7 56.9 21.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-282   LEU-283  7.4 7.6 0.4 0.8 42.4 40.5 -0.6
 LEU-283   LYS-284  4.9 5.1 -0.9 -4.9 65.3 61.5 13.1
 LYS-284   PRO-285  1.9 2.4 16.9 0.1 60.5 67.8 39.2
 PRO-285   SER-286  1.8 1.7 -14.0 0.3 106.8 104.7 53.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-331   ASP-332  6.9 6.6 8.2 -6.7 153.6 145.8 -7.0
 ASP-332   ALA-333  8.7 8.2 2.3 -4.1 139.5 143.8 4.4
 ALA-333   ILE-334  9.0 9.2 2.0 -6.8 106.8 112.8 -3.1
 ILE-334   LYS-335  5.6 6.2 9.3 3.2 120.8 110.4 -16.8
 LYS-335   PRO-336  4.0 4.0 -1.2 -5.4 12.4 8.7 22.3
 PRO-336   LYS-337  4.3 4.5 8.9 3.9 101.6 103.0 -0.2
 LYS-337   LEU-338  3.1 4.1 -8.2 15.1 114.8 102.4 17.0
 LEU-338   ASN-339  0.9 1.7 2.5 -24.6 122.9 135.5 29.9
 ASN-339   GLU-340  3.9 3.8 18.8 -2.6 60.9 63.6 12.2
 GLU-340   GLU-341  6.4 6.4 -5.2 -3.8 163.1 161.1 -17.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees