5'-Nucleotidase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-353   ASN-354  8.3 8.1 -12.3 32.2 84.7 80.5 3.0
 ASN-354   LYS-355  4.8 4.9 -32.0 -10.9 103.5 118.3 -19.7
 LYS-355   GLY-356  5.2 6.0 -147.4 -131.4 140.0 165.9 80.3
 GLY-356   LYS-357  3.1 5.8 -70.0 -6.5 113.9 103.5 -17.1
 LYS-357   ALA-358  1.3 2.6 8.8 -12.4 70.3 93.8 0.8
 ALA-358   GLN-359  3.0 2.4 1.3 4.6 26.7 35.4 1.7
 GLN-359   LEU-360  3.3 4.9 26.0 -5.4 39.4 36.9 24.5
 LEU-360   GLU-361  0.5 2.0 6.9 5.8 77.6 82.9 0.2
 GLU-361   VAL-362  4.3 4.2 -15.6 -1.7 99.8 102.4 0.0
 VAL-362   LYS-363  6.2 7.1 8.6 3.9 27.0 14.9 14.5
 LYS-363   ILE-364  8.6 9.1 -3.1 5.4 124.6 122.6 -2.4

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees