Regulator Of Nonsense Transcripts 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-316   ASP-317  11.9 11.8 2.4 -12.9 82.0 82.7 14.7
 ASP-317   LYS-318  8.2 8.0 25.5 -8.6 30.1 40.9 88.2
 LYS-318   LYS-319  8.3 8.3 -3.8 15.4 129.6 128.5 44.8
 LYS-319   LEU-320  9.2 9.1 -3.7 -9.2 73.1 78.8 -57.1
 LEU-320   LYS-321  7.7 7.0 2.7 -7.7 72.0 72.5 -73.9
 LYS-321   GLU-322  4.2 3.5 2.5 -6.4 20.1 11.4 -34.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-325   GLN-326  4.2 4.5 3.9 -13.1 77.3 82.9 -15.6
 GLN-326   ASP-327  7.3 7.6 32.5 -72.5 11.8 29.5 -526.7
 ASP-327   ASN-328  8.3 8.9 18.5 70.8 64.7 74.8 341.6
 ASN-328   ILE-329  10.9 12.7 -63.4 9.1 52.9 60.9 364.6
 ILE-329   THR-330  12.6 13.1 -7.7 -20.5 120.1 125.2 -182.9
 THR-330   VAL-331  15.2 15.6 -16.2 53.1 62.3 56.6 -156.4
 VAL-331   ARG-332  15.5 15.6 18.3 -10.0 69.3 98.7 -17.6
 ARG-332   TRP-333  18.6 19.0 -54.6 7.7 81.1 91.2 153.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-343   TYR-344  18.6 16.5 -8.4 52.4 148.8 41.3 -92.3
 TYR-344   PHE-345  17.0 16.4 -5.1 -10.6 116.1 115.8 -164.3
 PHE-345   THR-346  15.0 14.5 -3.4 -3.7 42.3 39.9 57.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-350   ASP-351  11.1 10.8 0.0 -5.3 138.3 149.2 -85.3
 ASP-351   SER-352  9.6 9.9 -76.2 53.5 83.7 88.7 1.5
 SER-352   ASP-353  7.1 7.3 -21.8 27.0 151.0 136.7 40.2
 ASP-353   MET-354  5.1 4.8 19.7 16.6 96.4 115.7 -375.6
 MET-354   ARG-355  1.9 2.2 -34.4 21.3 51.5 79.3 151.3
 ARG-355   LEU-356  3.4 3.3 -33.4 -0.8 65.1 58.7 166.9
 LEU-356   MET-357  4.6 4.7 -4.0 18.0 135.1 128.0 138.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-387   GLY-388  20.5 20.6 -14.9 10.3 13.9 30.8 68.7
 GLY-388   ASP-389  20.3 19.8 83.7 -53.0 117.7 104.1 -111.5
 ASP-389   GLU-390  16.8 16.7 -33.9 25.4 9.3 20.5 33.0
 GLU-390   ILE-391  15.7 16.0 -42.0 34.7 93.2 86.2 -113.7
 GLU-390   ILE-391  15.7 16.0 -42.0 34.7 93.2 86.2 -113.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-390   ILE-391  15.7 16.0 -42.0 34.7 93.2 86.2 -113.7
 GLU-390   ILE-391  15.7 16.0 -42.0 34.7 93.2 86.2 -113.7
 ILE-391   ALA-392  13.2 13.1 -4.6 25.8 133.2 127.9 156.9
 ALA-392   ILE-393  14.5 14.8 -6.4 11.6 85.3 96.0 -163.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-395   ARG-396  15.6 15.8 13.8 24.3 90.9 95.4 -65.3
 ARG-396   SER-397  17.6 17.6 -58.1 31.3 26.0 39.8 280.8
 SER-397   SER-398  18.2 18.8 108.0 -148.2 112.7 100.6 48.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-411   ASP-412  5.6 6.2 -16.6 6.3 70.6 77.4 79.4
 ASP-412   PHE-413  2.3 2.7 -6.8 6.8 30.1 34.1 -71.7
 PHE-413   VAL-414  2.1 2.4 2.3 -11.3 83.4 81.7 -17.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-415   LYS-416  6.5 6.5 9.2 -7.9 77.5 81.3 -73.1
 LYS-416   SER-417  9.4 9.7 -1.2 14.3 122.1 126.5 79.2
 SER-417   THR-418  12.1 12.2 -4.8 23.7 140.1 139.6 192.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-663   CYS-664  8.1 8.0 -0.1 2.2 85.4 92.2 -1.7
 CYS-664   GLN-665  6.9 7.0 -6.8 9.9 119.0 122.7 55.3
 GLN-665   LEU-666  3.8 3.9 10.8 -22.1 20.3 22.3 -88.3
 LEU-666   GLY-667  3.3 3.4 6.9 -1.1 77.5 78.7 39.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-695   ILE-696  13.1 13.6 -8.9 20.5 28.0 27.7 -97.9
 ILE-696   ARG-697  11.4 12.4 8.6 -23.9 76.1 81.7 -160.0
 ARG-697   LEU-698  7.7 8.8 -0.7 -31.6 62.8 64.9 184.3
 LEU-698   GLN-699  5.7 5.8 6.5 -33.4 115.7 92.9 273.4
 GLN-699   VAL-700  3.3 2.6 12.4 10.8 93.5 100.7 -31.9
 VAL-700   GLN-701  2.5 2.2 -30.6 28.4 147.9 138.4 -28.1
 GLN-701   TYR-702  4.1 4.2 7.2 -6.7 105.8 110.2 -70.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees