Glutamate Receptor 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-107   SER-108  10.5 10.7 -1.2 -0.8 30.0 28.2 28.4
 SER-108   LEU-109  9.6 9.9 2.8 -10.9 82.8 83.8 -2.1
 LEU-109   GLY-110  6.5 7.0 8.0 -14.1 149.7 155.7 45.9
 GLY-110   ILE-111  6.1 6.0 5.8 0.9 83.4 83.6 33.8
 ILE-111   SER-112  5.7 5.7 -5.3 11.7 113.5 113.9 -43.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-192   GLU-193  5.5 5.3 6.1 -4.4 100.5 100.0 16.1
 GLU-193   SER-194  2.8 2.8 -3.0 4.3 38.4 39.1 -14.8
 SER-194   THR-195  5.5 5.6 0.6 -6.1 153.3 155.2 60.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-199   ILE-200  3.8 3.9 1.4 -0.2 67.6 67.6 44.9
 ILE-200   GLU-201  6.3 6.3 3.9 -6.4 67.0 68.2 12.8
 GLU-201   GLN-202  9.0 9.0 2.2 -5.9 15.5 15.2 -51.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-216   SER-217  8.0 8.0 -3.6 8.7 45.6 44.7 -63.3
 SER-217   LYS-218  8.6 8.9 -5.9 16.8 97.7 94.0 -82.0
 LYS-218   GLY-219  7.7 7.6 -2.3 -15.7 29.1 35.0 244.9
 GLY-219   TYR-220  9.2 9.3 -4.8 -4.6 76.6 76.2 -49.3
 TYR-220   GLY-221  9.4 9.6 -8.3 7.1 86.4 85.3 9.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-255   TYR-256  5.2 5.2 -2.5 7.5 128.6 127.0 3.3
 TYR-256   ASP-257  7.8 7.9 2.8 -3.6 7.9 8.0 -11.7
 ASP-257   LYS-258  7.9 7.9 4.4 -3.3 65.9 69.2 53.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees