D-Maltodextrin-Binding Protein 3

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-108   ALA-109  8.8 9.0 14.6 -32.0 134.6 133.1 28.0
 ALA-109   VAL-110  5.5 5.6 -3.0 18.1 117.6 116.0 12.4
 VAL-110   GLU-111  1.9 1.9 -26.2 30.2 65.9 62.4 20.9
 GLU-111   ALA-112  2.0 3.0 -8.6 16.0 111.4 97.8 11.4
 ALA-112   LEU-113  5.1 5.1 -13.3 -1.0 50.3 54.6 18.2
 LEU-113   SER-114  8.6 8.6 -7.9 8.7 44.1 42.5 6.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-256   PRO-257  12.5 12.6 8.9 7.6 102.5 108.9 5.6
 PRO-257   PHE-258  9.9 9.8 -2.3 -3.1 53.2 44.2 20.0
 PHE-258   VAL-259  7.1 7.4 -11.9 8.3 129.8 124.5 6.2
 VAL-259   GLY-260  3.7 4.0 7.0 -5.5 118.9 123.5 9.7
 GLY-260   VAL-261  1.7 2.5 2.8 17.7 63.8 59.9 48.3
 VAL-261   LEU-262  2.9 3.0 -13.0 9.4 80.1 80.2 4.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-309   GLU-310  9.8 10.1 -7.6 -8.7 35.8 32.2 56.6
 GLU-310   LEU-311  8.9 9.0 21.7 -14.1 90.5 86.2 3.1
 LEU-311   ALA-312  5.6 5.7 4.1 -98.3 100.8 100.7 160.3
 ALA-312   LYS-313  5.0 4.1 105.2 30.9 161.4 108.2 -121.7
 LYS-313   ASP-314  4.5 4.5 -19.9 21.7 83.4 77.8 20.9
 ASP-314   PRO-315  1.0 0.8 7.9 2.6 59.5 69.9 21.0
 PRO-315   ARG-316  4.2 3.4 -7.4 5.3 144.3 143.5 -8.5
 ARG-316   ILE-317  4.0 3.9 -7.4 5.9 141.5 145.5 3.4
 ILE-317   ALA-318  1.3 1.1 -2.7 -0.2 104.4 99.2 -1.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-325   LYS-326  9.2 9.3 -8.0 8.7 64.6 65.6 -2.4
 LYS-326   GLY-327  11.5 11.7 2.8 -15.6 140.6 147.1 35.4
 GLY-327   GLU-328  9.5 9.6 16.0 -35.4 155.2 138.4 61.7
 GLU-328   ILE-329  8.6 8.1 17.7 -4.8 101.7 103.5 -50.1
 ILE-329   MET-330  5.3 4.7 3.3 -2.6 137.1 152.4 0.1
 MET-330   PRO-331  4.1 3.9 29.3 -11.1 145.3 135.5 -13.1
 PRO-331   ASN-332  3.6 3.1 20.6 -20.7 104.0 95.9 31.5
 ASN-332   ILE-333  0.2 0.7 3.9 26.3 164.2 171.2 -77.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees