Oligopeptide-Binding Protein Oppa

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-297   GLN-298  4.9 5.6 -13.6 -10.5 100.7 109.1 9.1
 GLN-298   ALA-299  3.4 4.3 3.9 3.6 68.0 49.9 26.6
 TYR-301   ILE-302  5.1 4.9 -11.2 18.4 95.9 89.7 1.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-473   SER-474  9.9 9.7 17.2 -10.9 79.3 79.7 3.5
 SER-474   LEU-475  7.3 6.6 23.3 -20.1 172.1 164.0 0.3
 LEU-475   ALA-476  5.9 4.6 -15.3 -12.2 57.9 72.6 11.2
 ALA-476   SER-477  5.3 3.5 17.9 19.0 91.3 103.2 -18.2
 SER-477   GLU-478  2.6 1.9 -57.2 36.8 37.4 38.5 75.9
 GLU-478   PRO-479  0.9 0.7 -32.8 -10.8 99.1 111.0 -53.2
 PRO-479   SER-480  4.1 3.7 73.3 -8.6 118.1 124.5 -91.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-543   ASN-544  2.3 2.9 3.3 -21.0 66.8 67.5 -15.3
 ASN-544   TYR-545  1.5 1.3 -16.2 24.2 131.5 123.1 46.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees