Major Prion Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  LYS-194   GLY-195  0.5 4.0 -52.7 -140.0 118.4 119.4 -46.1  GLY-195   GLU-196  3.1 6.5 -50.7 64.3 170.2 100.8 7.9  GLU-196   ASN-197  2.4 5.4 150.4 65.7 72.7 25.4 -61.5  ASN-197   PHE-198  5.1 3.1 178.7 45.4 33.9 34.0 -68.0  PHE-198   THR-199  6.1 5.2 16.8 -40.4 54.8 62.3 195.2 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees