N-Lysine Methyltransferase Smyd2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-273   LYS-274  2.4 1.9 2.6 -1.9 98.6 98.8 -24.9
 LYS-274   ALA-275  5.3 4.9 -8.5 9.5 21.8 21.2 -24.0
 ALA-275   LYS-276  5.7 5.2 -5.4 3.6 65.9 70.3 89.7
 LYS-276   VAL-277  2.4 2.1 -20.1 9.4 71.9 75.4 17.9
 LYS-276   VAL-277  2.4 2.1 -20.1 9.4 71.9 75.4 17.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-276   VAL-277  2.4 2.1 -20.1 9.4 71.9 75.4 17.9
 LYS-276   VAL-277  2.4 2.1 -20.1 9.4 71.9 75.4 17.9
 VAL-277   GLU-278  5.3 5.0 5.0 -3.6 86.4 89.6 -22.1
 GLU-278   ILE-279  8.1 7.7 2.1 -5.4 94.4 92.2 84.4
 ILE-279   ARG-280  11.5 11.2 2.4 -3.7 53.8 57.8 5.6
 ARG-280   LYS-281  14.6 14.3 15.4 12.9 121.5 123.5 -172.9
 LYS-281   LEU-282  17.2 17.0 4.9 -10.0 77.2 90.8 -30.5
 LEU-282   SER-283  20.4 19.8 -16.1 -30.9 58.2 52.6 261.0
 SER-283   ASP-284  23.9 23.2 14.6 -14.7 169.7 139.0 -17.2
 ASP-284   PRO-285  23.2 23.2 -4.8 -20.4 88.1 89.5 28.1
 PRO-285   PRO-286  19.3 19.5 20.3 -29.7 126.6 129.8 60.5
 PRO-286   LYS-287  17.4 18.7 34.1 16.8 154.1 146.2 -492.4
 LYS-287   ALA-288  16.7 17.4 -10.3 6.9 81.5 95.1 127.4
 ALA-288   GLU-289  13.4 13.6 9.1 -4.8 90.5 92.4 89.4
 GLU-289   ALA-290  14.7 14.5 -0.8 -4.4 153.3 149.2 -42.7
 ALA-290   ILE-291  16.2 16.5 -15.9 14.0 128.8 136.0 -43.7
 ILE-291   ARG-292  12.6 13.2 -1.1 2.3 74.4 80.6 17.0
 ARG-292   ASP-293  11.9 11.7 -3.3 -6.5 111.3 108.3 -46.5
 ASP-293   MET-294  15.3 15.1 19.4 -2.2 20.3 12.5 144.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-362   GLY-363  8.8 8.8 -3.6 14.8 82.7 86.4 24.8
 GLY-363   GLN-364  5.2 5.3 -12.2 -0.9 93.4 89.0 -11.3
 GLN-364   LYS-365  5.4 5.1 21.0 -25.1 157.0 152.3 14.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-385   LEU-386  4.1 4.4 8.4 -10.0 144.3 143.4 9.6
 LEU-386   LYS-387  6.7 7.2 6.2 -8.2 108.6 106.0 -3.4
 LYS-387   LEU-388  6.3 6.8 1.1 -1.6 119.0 120.5 -24.6
 LEU-388   GLY-389  2.8 3.3 -1.7 -4.8 159.8 160.1 -62.0
 LEU-388   GLY-389  2.8 3.3 -1.7 -4.8 159.8 160.1 -62.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-388   GLY-389  2.8 3.3 -1.7 -4.8 159.8 160.1 -62.0
 LEU-388   GLY-389  2.8 3.3 -1.7 -4.8 159.8 160.1 -62.0
 GLY-389   ARG-390  3.2 3.6 1.0 2.2 51.2 48.2 25.7
 ARG-390   LEU-391  5.9 6.5 6.8 -9.4 79.8 78.5 27.8
 LEU-391   TYR-392  6.0 6.2 12.6 -19.5 50.6 52.2 -29.9
 TYR-392   MET-393  3.3 3.1 0.5 12.8 17.6 21.9 125.7
 MET-393   GLY-394  3.6 3.8 -17.1 -0.1 111.9 118.6 -126.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-395   GLU-396  7.3 7.0 10.6 1.8 46.4 50.9 134.8
 GLU-396   HIS-397  4.6 4.3 -40.0 34.1 72.0 71.4 -52.4
 HIS-397   LYS-398  3.8 3.1 -11.7 -8.0 79.1 80.7 -28.2
 LYS-398   ALA-399  1.8 1.0 21.7 -7.3 130.6 113.8 -76.4
 ALA-399   ALA-400  5.2 4.5 2.4 -0.5 169.6 172.6 -12.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-401   GLU-402  1.6 2.1 -2.0 5.7 89.5 87.7 -28.0
 GLU-402   LYS-403  5.3 5.7 -1.6 -9.6 35.1 34.5 86.4
 LYS-403   ALA-404  6.5 6.6 8.3 -6.0 139.5 143.5 -35.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees