Galactose/glucose-Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-13   ASP-14  8.6 8.5 -8.6 13.4 135.8 138.8 225.9
 ASP-14   ASN-15  9.3 9.3 4.4 -3.3 80.4 79.0 7.4
 ASN-15   PHE-16  6.5 6.5 -2.4 0.6 140.7 141.2 66.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-17   SER-18  6.7 6.7 -2.0 3.9 133.8 135.0 24.7
 SER-18   VAL-19  4.5 4.6 -4.2 2.9 64.1 63.7 18.5
 VAL-19   VAL-20  1.9 1.9 -1.1 -3.0 55.3 55.7 23.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-108   GLY-109  11.0 11.0 4.9 -5.4 111.4 110.6 -6.3
 GLY-109   THR-110  9.1 9.1 4.5 -2.0 57.1 53.7 8.7
 THR-110   ASP-111  7.7 7.6 -1.6 1.3 125.3 127.6 172.7
 ASP-111   SER-112  9.5 9.4 4.4 -6.2 120.4 117.9 -123.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-255   ASN-256  6.3 6.2 -0.3 3.4 72.7 75.4 -85.6
 ASN-256   ASP-257  4.3 4.4 -4.4 1.5 107.1 108.4 -118.3
 ASP-257   ALA-258  0.6 0.6 -2.6 5.0 121.3 122.0 67.5
 ALA-258   ASN-259  1.9 1.9 1.3 3.9 93.7 96.4 -22.3
 ASN-259   ASN-260  4.4 4.3 -7.7 3.0 34.1 39.3 134.3
 ASN-260   GLN-261  5.1 5.1 -6.4 3.5 88.5 91.7 -114.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-292   VAL-293  7.0 7.2 -6.8 6.0 86.8 87.5 -111.3
 VAL-293   PRO-294  3.6 3.7 7.7 -6.7 86.0 84.0 5.2
 PRO-294   TYR-295  2.5 2.6 -1.7 3.4 37.0 36.7 66.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees