Glutamyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-373   THR-374  3.4 3.5 4.8 -10.1 140.6 141.7 72.2
 THR-374   GLU-375  2.7 2.4 0.7 1.2 86.8 85.4 -1.2
 GLU-375   ASP-376  3.8 3.7 -0.1 -3.2 107.5 104.5 -23.9
 ASP-376   TYR-377  6.9 6.8 -1.7 3.9 173.7 168.4 48.9
 TYR-377   PRO-378  6.9 6.8 -3.9 4.4 106.7 107.5 -6.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-440   SER-441  8.6 8.7 -11.9 13.4 19.4 17.1 -21.2
 SER-441   LEU-442  8.0 8.0 -6.7 15.6 53.3 54.3 -84.8
 LEU-442   GLU-443  9.1 9.2 -8.7 -6.3 43.7 49.6 134.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-444   PRO-445  4.1 3.7 3.8 2.8 65.7 63.7 42.5
 PRO-445   GLY-446  5.5 5.3 5.9 6.3 102.3 104.8 -34.6
 GLY-446   LEU-447  9.3 9.1 -20.3 10.9 23.5 27.3 108.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees