Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-106
THR-107
5.2
5.5
-16.6
-1.1
50.4
52.1
81.7
THR-107
LEU-108
3.7
4.3
-7.7
3.1
126.2
126.0
-32.2
LEU-108
GLY-109
3.1
3.8
14.0
-8.4
130.7
126.4
-10.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-212
SER-213
8.3
8.5
-18.5
22.0
68.2
68.6
3.8
SER-213
LYS-214
5.6
5.6
-5.3
30.0
110.4
99.0
60.0
LYS-214
GLY-215
1.8
2.0
-20.2
4.4
46.9
60.1
52.8
GLY-215
TYR-216
1.7
1.8
-8.5
-6.5
77.2
73.3
20.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees