Periplasmic Binding Protein/laci Transcriptional Regulator
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-114
VAL-115
3.4
3.1
3.5
-4.4
44.1
46.2
-11.3
VAL-115
GLY-116
4.3
3.9
8.5
28.3
31.7
34.1
59.0
GLY-116
THR-117
2.9
2.1
-10.9
15.2
108.4
118.8
14.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-249
VAL-250
1.9
1.6
8.3
-27.4
61.1
61.9
-20.3
VAL-250
GLN-251
1.7
1.9
20.1
38.2
7.6
27.1
109.7
GLN-251
LYS-252
2.9
3.0
-8.9
0.7
96.1
87.9
-11.6
LYS-252
SER-253
6.0
6.3
18.2
0.9
60.6
52.0
19.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-271
SER-272
14.2
15.2
45.5
164.9
69.5
64.6
19.1
SER-278
LEU-279
5.4
4.5
-36.7
-5.8
132.0
156.3
-65.6
LEU-279
ILE-280
3.0
3.6
-15.4
-10.8
148.4
134.2
-39.9
ILE-280
ASP-281
3.2
4.8
29.2
-0.1
35.9
33.7
42.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees