Tryptophanyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-30   HIS-31  10.7 10.2 30.0 -31.7 18.8 19.0 -30.8
 HIS-31   GLU-32  10.2 10.1 5.2 -9.9 49.1 52.6 -38.0
 GLU-32   TYR-33  13.1 13.2 -1.8 1.5 84.6 80.0 46.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-60   LEU-61  2.1 1.6 -5.6 4.4 46.2 45.1 1.3
 LEU-61   ALA-62  5.0 4.2 0.3 -12.4 159.3 159.9 107.7
 ALA-62   ALA-63  2.9 2.2 7.2 -1.0 100.3 102.5 -41.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-66   ALA-67  4.5 4.3 -11.2 13.5 81.4 83.5 13.8
 ALA-67   VAL-68  7.6 7.4 -18.1 17.3 112.6 114.7 43.2
 VAL-68   GLY-69  9.9 9.6 -1.4 -5.1 176.4 178.1 -64.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-173   ALA-174  25.3 25.5 2.1 -27.3 56.8 50.0 -94.7
 ALA-174   ARG-175  24.2 24.8 -51.3 48.6 59.7 75.7 27.4
 ARG-175   ILE-176  23.1 23.9 52.2 12.8 32.2 32.7 385.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-285   ARG-286  12.8 13.2 -31.4 22.4 126.5 118.6 -23.9
 ARG-286   TYR-287  10.1 10.5 -12.3 9.7 57.4 54.4 8.9
 TYR-287   HIS-288  7.5 7.8 -7.4 6.9 60.1 62.2 18.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees