Fab 29G12 Light Chain

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-102   LYS-103  9.7 9.7 0.5 -7.5 89.8 88.6 -9.2
 LYS-103   LEU-104  6.1 6.1 -5.3 -10.4 160.4 154.9 -41.6
 LEU-104   GLU-105  5.2 5.1 -18.6 -1.4 84.4 82.0 35.2
 GLU-105   ILE-106  1.6 1.7 16.7 11.6 33.2 27.8 91.2
 ILE-106   LYS-107  3.3 3.1 6.4 -6.6 65.7 66.0 17.7
 LYS-107   ARG-108  3.3 3.0 -12.7 13.2 99.1 103.0 1.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees