Propionate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-90   GLN-91  8.4 10.4 -13.7 21.9 100.3 105.1 22.2
 GLN-91   TYR-92  8.4 10.5 -39.4 4.0 51.8 47.3 120.5
 TYR-92   PHE-93  10.8 12.8 1.4 -0.1 134.4 144.6 -2.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-94   LYS-95  6.8 7.0 26.9 5.7 28.2 50.1 134.6
 LYS-95   SER-96  6.9 7.1 -6.9 5.1 130.8 145.3 12.1
 SER-96   VAL-97  6.8 7.1 -9.3 -0.2 100.6 102.6 -14.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-140   PHE-141  4.5 4.8 -6.8 13.6 136.6 139.8 -5.0
 PHE-141   ASP-142  4.6 5.0 8.7 -1.0 68.7 69.0 50.8
 ASP-142   THR-143  4.1 4.1 -2.2 10.5 155.0 145.3 37.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-372   GLU-373  6.0 6.4 -2.8 4.3 135.7 137.6 20.3
 GLU-373   LEU-374  5.1 5.3 -0.1 -4.4 113.6 112.1 24.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees