Cag-Alpha

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-133   ILE-134  11.9 11.9 10.7 -12.8 84.8 83.0 30.9
 ILE-134   PRO-135  11.6 11.4 -10.0 4.2 56.8 59.6 -29.4
 PRO-135   SER-136  10.4 10.2 -115.4 70.9 114.3 124.1 -170.8
 SER-136   LYS-137  9.0 9.6 -1.0 34.3 91.6 66.5 2.7
 LYS-137   THR-138  12.5 12.9 72.0 -37.7 54.2 63.9 239.8
 THR-138   THR-139  12.3 13.3 45.3 -50.9 115.6 131.5 53.9
 THR-139   TYR-140  13.1 13.9 -73.5 70.8 132.9 118.1 -41.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-176   CYS-177  5.7 5.5 10.0 -8.5 99.0 96.7 -68.1
 CYS-177   GLY-178  4.7 4.7 -12.1 -0.6 20.6 20.4 195.7
 GLY-178   GLY-179  5.4 5.2 -3.6 -4.1 83.2 83.2 -8.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-180   GLY-181  5.5 5.1 -3.8 2.3 155.7 150.5 3.8
 GLY-181   SER-182  3.2 2.9 -23.4 23.7 104.2 108.5 -30.4
 SER-182   GLY-183  1.8 1.5 11.0 -11.0 95.5 95.9 -24.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees