Preprotein Translocase Seca Subunit

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-229   SER-230  2.4 4.5 -142.1 37.1 15.2 53.3 97.7
 SER-230   THR-231  3.8 4.9 -134.9 51.7 56.3 30.6 77.5
 THR-231   LYS-232  2.5 2.8 -25.8 -7.5 41.9 43.0 25.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-346   ASN-347  5.6 5.6 42.4 -46.6 133.2 132.1 -4.7
 ASN-347   GLU-348  3.4 2.8 -83.6 -8.9 17.9 37.3 97.0
 GLU-348   SER-349  3.9 4.9 5.5 2.5 116.4 142.2 -5.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees