DNA Primase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TRP-522
ASP-523
39.2
41.0
-159.7
55.5
119.1
133.7
-157.5
ASP-523
ASP-524
35.8
39.9
-46.8
53.0
96.6
63.1
-3.7
ASP-524
ILE-525
33.2
37.6
-92.8
33.0
125.7
81.2
-56.2
ILE-525
ALA-526
34.6
36.2
5.9
-18.3
49.1
34.1
-9.2
ALA-526
ASP-527
31.8
35.4
-166.1
10.7
61.5
105.7
55.4
ASP-527
LYS-528
29.6
33.8
-147.6
-16.6
90.0
55.9
217.3
LYS-528
ASN-529
26.1
31.5
-9.4
3.7
115.5
110.9
-16.6
ASN-529
ILE-530
25.0
30.8
-4.9
-5.8
173.3
141.8
-29.9
ILE-530
ALA-531
25.8
29.5
0.4
-2.6
79.2
100.0
25.8
ALA-531
GLU-532
24.1
27.7
16.6
-4.7
86.1
116.3
-6.1
GLU-532
GLN-533
20.7
25.9
9.5
-14.4
31.9
44.6
3.6
GLN-533
THR-534
21.3
25.1
4.6
3.5
35.3
56.9
7.9
THR-534
PHE-535
21.7
23.7
-8.8
6.3
91.3
58.2
2.5
PHE-535
THR-536
18.8
21.6
2.6
-4.8
69.7
85.9
-21.3
THR-536
ASP-537
16.5
20.1
18.2
-17.8
12.9
28.0
19.8
ASP-537
SER-538
17.8
19.5
-8.8
10.3
123.2
99.4
0.6
SER-538
LEU-539
17.2
17.9
2.8
-10.5
92.1
123.1
-31.1
LEU-539
ASN-540
13.7
15.6
8.2
2.0
46.2
56.3
29.0
ASN-540
HIS-541
13.1
14.5
-3.2
-28.4
161.4
134.4
-86.1
PHE-543
ASP-544
9.1
8.8
46.0
7.5
26.7
7.1
151.7
ASP-544
SER-545
10.0
9.6
2.8
0.4
48.3
62.1
22.5
SER-545
LEU-546
10.5
10.1
7.1
-11.8
89.4
95.2
2.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees