Triosephosphate Isomerase (E.C.5.3.1.1)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-125   CYS-126  2.8 2.8 3.8 8.0 118.0 120.1 -173.3
 CYS-126   ILE-127  4.4 4.6 -0.6 -1.4 107.3 104.5 13.9
 ILE-127   GLY-128  5.7 5.7 -10.5 9.2 51.7 53.0 65.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-146   ILE-147  7.5 7.5 -8.7 0.6 105.6 100.7 22.6
 ILE-147   ALA-148  6.4 6.2 2.8 -5.1 123.9 126.0 144.5
 ALA-148   ALA-149  9.3 9.0 14.0 -17.4 157.1 160.1 -155.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-162   VAL-163  7.0 7.1 2.9 -5.1 155.3 153.2 83.0
 VAL-163   ILE-164  5.0 5.0 -6.6 -2.4 108.0 105.0 -96.3
 ILE-164   ALA-165  1.2 1.2 4.3 -8.7 118.9 121.7 190.1
 ALA-165   TYR-166  3.6 3.7 3.1 -14.9 86.7 86.2 -192.7
 TYR-166   GLU-167  5.4 5.4 -7.9 -17.3 90.3 82.7 285.3
 GLU-167   PRO-168  9.0 8.9 -28.3 26.8 81.3 103.5 -141.4
 PRO-168   VAL-169  11.9 11.7 47.4 4.7 57.7 66.9 755.6
 VAL-169   TRP-170  14.0 14.2 -1.5 -5.8 78.7 61.0 260.7
 TRP-170   ALA-171  16.9 17.1 -4.0 15.9 43.9 46.7 -537.9
 ALA-171   ILE-172  17.1 15.7 -8.6 26.1 110.8 114.1 289.0
 ILE-172   GLY-173  17.4 16.0 -2.0 -3.0 118.4 92.4 244.9
 GLY-173   THR-174  21.2 19.1 8.3 -5.8 87.2 104.0 -387.9
 THR-174   GLY-175  22.3 20.9 -7.3 -8.6 40.8 14.5 472.0
 GLY-175   LYS-176  23.8 20.4 -13.5 12.7 51.0 67.3 182.1
 LYS-176   VAL-177  21.1 19.1 -85.6 50.8 60.1 87.5 70.1
 VAL-177   ALA-178  18.7 15.5 11.3 29.2 102.3 109.1 -255.4
 ALA-178   THR-179  15.1 13.4 14.0 28.2 159.3 167.1 -982.3
 THR-179   PRO-180  13.8 12.9 -7.9 7.0 90.2 86.3 40.3
 PRO-180   GLN-181  10.1 9.3 -3.4 2.2 88.1 96.6 -112.6
 GLN-181   GLN-182  10.7 10.7 1.7 -7.5 23.2 14.2 101.9
 GLN-182   ALA-183  11.9 11.6 -0.4 -2.2 122.3 120.0 -80.1
 ALA-183   GLN-184  8.7 8.2 -1.6 5.2 80.2 80.6 -47.6
 GLN-184   GLU-185  7.0 6.9 -5.5 -7.8 112.6 116.5 -584.9
 GLU-185   ALA-186  9.9 9.9 19.0 -10.5 17.5 13.6 566.1
 ALA-186   HIS-187  8.9 8.8 0.6 -1.8 88.2 80.8 -126.1
 HIS-187   ALA-188  5.4 5.4 -0.9 1.2 77.1 81.4 -11.2
 ALA-188   LEU-189  7.6 7.7 -11.9 13.8 136.2 138.1 -207.1
 LEU-189   ILE-190  9.9 10.0 -5.1 1.9 138.3 138.9 179.2
 ILE-190   ARG-191  7.3 7.3 11.1 -10.6 107.0 104.6 -31.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees