Thermosome

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-30   LEU-31  7.0 6.9 -2.8 -10.3 58.6 55.2 44.5
 LEU-31   GLU-32  3.9 3.7 -14.8 -30.2 18.9 25.4 213.1
 GLU-32   ILE-33  5.5 5.3 -16.5 -7.9 59.8 71.9 44.4
 ILE-33   LYS-34  7.3 8.0 -9.9 21.2 89.3 75.5 -22.7
 LYS-34   LYS-35  11.1 11.1 21.8 -0.8 158.1 165.8 -97.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-56   GLU-57  10.7 10.7 -8.6 7.8 35.9 29.4 9.8
 GLU-57   THR-58  8.5 8.7 -14.3 2.7 71.4 69.2 41.8
 THR-58   ASN-59  5.8 5.6 -3.5 6.2 53.2 67.9 -11.6
 ASN-59   THR-60  8.9 8.7 -1.0 -3.6 32.4 29.5 5.1
 THR-60   PHE-61  9.9 10.2 -4.6 9.3 45.7 44.8 -12.7
 PHE-61   LYS-62  6.5 6.8 -2.1 -4.6 64.7 74.2 35.1
 LYS-62   GLN-63  6.5 6.7 3.1 -0.7 132.3 125.8 -20.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-81   ILE-82  7.6 7.3 -7.6 7.3 73.9 70.8 -8.6
 ILE-82   ASP-83  4.3 4.2 -6.1 -18.3 17.4 25.0 125.9
 ASP-83   ASP-84  4.0 4.4 29.4 -7.1 97.9 102.7 -33.7
 ASP-84   VAL-85  5.5 5.2 3.0 10.3 75.0 80.2 4.2
 ASP-84   VAL-85  5.5 5.2 3.0 10.3 75.0 80.2 4.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-84   VAL-85  5.5 5.2 3.0 10.3 75.0 80.2 4.2
 ASP-84   VAL-85  5.5 5.2 3.0 10.3 75.0 80.2 4.2
 VAL-85   ALA-86  3.6 2.8 -7.8 -9.1 36.6 28.2 79.8
 ALA-86   GLN-87  2.2 2.3 8.1 -4.9 125.9 115.6 -27.1
 GLN-87   HIS-88  5.1 5.6 -11.5 8.5 109.3 105.7 12.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees