Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-107
LEU-108
7.7
7.0
21.9
-12.2
110.0
115.8
-26.2
LEU-108
GLY-109
4.3
3.4
-8.4
19.4
138.5
137.9
22.2
GLY-109
ILE-110
2.2
1.6
-47.8
29.5
62.8
69.1
27.8
ILE-110
SER-111
4.1
3.7
2.6
-19.1
120.0
114.1
24.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-208
GLY-209
12.2
12.3
20.7
-24.5
98.3
91.9
-24.2
GLY-209
LEU-210
10.8
10.0
-0.7
20.0
75.8
66.4
-23.9
LEU-210
ILE-211
7.4
6.7
0.6
15.9
157.7
155.9
-45.4
ILE-211
ASP-212
6.6
6.7
174.0
157.9
109.6
137.3
10.5
ASP-212
SER-213
3.6
3.7
134.5
-89.4
70.7
62.3
80.8
SER-213
LYS-214
4.5
3.5
-4.3
9.4
78.9
77.1
15.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees