Response Regulator

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-80   THR-81  8.0 8.0 1.4 5.8 159.1 160.4 -29.0
 THR-81   THR-82  8.2 8.1 1.1 0.0 119.7 118.9 -85.8
 THR-82   PHE-83  9.1 9.2 5.0 -11.1 117.1 119.9 161.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-84   ARG-85  3.9 3.6 -36.1 39.1 128.9 124.7 102.5
 ARG-85   ALA-86  0.8 0.8 12.8 -10.5 118.3 125.8 -71.5
 ALA-86   GLY-87  2.8 2.8 -1.4 6.1 80.5 79.6 -66.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-124   SER-125  3.0 3.0 -2.9 6.7 63.7 65.0 -138.7
 SER-125   PRO-126  4.7 4.7 2.7 -1.6 106.3 106.4 -82.9
 PRO-126   GLU-127  8.0 8.1 -6.1 6.2 7.6 6.7 69.0
 GLU-127   LEU-128  8.1 8.2 2.4 -5.0 119.8 116.7 149.2
 LEU-128   MET-129  5.0 5.1 2.8 -5.4 77.5 76.9 76.3
 MET-129   GLU-130  7.3 7.4 4.0 -3.2 130.2 129.5 -121.9
 GLU-130   MET-131  10.1 10.3 0.6 -1.0 153.7 155.1 164.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees