Glutaminyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-31   PRO-32  12.7 12.3 -3.4 17.9 103.9 109.4 -25.2
 PRO-32   PRO-33  12.4 12.3 10.3 12.2 52.0 64.4 83.3
 PRO-33   GLU-34  15.9 16.0 89.2 -91.4 82.3 54.2 22.7
 GLU-34   PRO-35  16.9 17.8 -25.7 15.9 66.6 65.1 175.4
 PRO-35   ASN-36  20.1 20.2 -44.9 12.0 132.1 133.5 -237.5
 ASN-36   GLY-37  22.4 22.2 -38.5 34.1 93.8 91.7 -17.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-64   PHE-65  11.7 11.3 -17.1 7.4 134.5 131.8 -36.0
 PHE-65   ASP-66  14.5 14.5 50.1 -40.2 42.9 53.2 51.5
 ASP-66   ASP-67  13.1 14.5 15.4 1.7 68.7 82.2 136.0
 ASP-67   THR-68  16.0 17.5 -38.2 32.5 124.7 123.8 -24.4
 THR-68   ASN-69  15.4 16.4 -20.6 47.7 129.7 123.5 160.4
 ASN-69   PRO-70  18.4 19.4 15.8 -22.2 120.4 117.7 1.2
 LYS-72   GLU-73  22.9 26.2 58.8 45.3 154.2 117.3 -829.9
 GLU-73   ASP-74  22.8 23.8 160.7 -160.1 123.2 105.3 180.7
 ASP-74   ILE-75  25.2 26.8 -87.2 19.2 23.0 38.6 591.2
 ILE-75   GLU-76  24.8 25.5 122.4 -118.7 108.6 104.0 -156.3
 GLU-76   TYR-77  27.0 26.4 0.4 6.0 85.9 72.2 -24.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-98   SER-99  13.1 12.8 -16.5 11.0 127.4 128.1 0.0
 SER-99   SER-100  11.8 11.7 0.5 -1.7 95.9 93.6 44.7
 SER-100   ASP-101  14.8 14.8 2.8 3.8 139.5 137.1 -36.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-215   CYS-216  6.1 6.3 -7.4 9.9 110.6 107.1 30.0
 CYS-216   ILE-217  2.4 2.6 0.0 0.4 135.5 135.4 20.7
 ILE-217   SER-218  4.6 4.7 -0.7 1.9 151.9 155.0 -40.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-235   ASN-236  7.3 6.4 -5.4 11.9 59.8 55.4 -54.8
 ASN-236   ARG-237  5.3 4.8 -6.5 -3.7 54.5 55.6 107.9
 ARG-237   ARG-238  4.8 4.5 2.3 -6.7 70.8 65.4 -15.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-250   VAL-251  9.1 8.9 -56.4 32.7 84.7 70.3 -11.4
 VAL-251   HIS-252  6.6 6.8 -17.4 24.2 25.7 25.9 -38.8
 HIS-252   PRO-253  5.6 5.9 11.5 -10.4 86.5 90.8 -0.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees