Binding Protein Component Of Abc Sugar Transporter

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-140   ASN-141  8.4 7.8 -15.1 4.2 122.5 123.7 2.7
 ASN-141   ILE-142  5.5 5.2 -11.8 4.9 64.3 62.7 23.6
 ILE-142   HIS-143  3.1 2.8 8.7 -4.3 79.4 77.0 10.7
 HIS-143   ARG-144  6.4 6.1 5.5 0.2 101.8 96.0 -8.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-300   ASN-301  5.2 5.2 0.0 6.3 133.2 131.9 28.0
 ASN-301   ILE-302  4.8 4.5 -9.0 1.9 61.6 63.1 21.9
 ILE-302   ASP-303  3.6 2.8 3.2 -10.6 64.9 62.4 -16.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-336   GLN-337  9.5 8.6 5.9 -4.6 50.9 45.2 -0.3
 GLN-337   ASN-338  11.0 10.2 -5.7 -7.3 62.6 65.6 8.0
 ASN-338   LYS-339  14.2 13.5 54.7 -61.6 150.3 157.7 43.3
 LYS-339   GLY-340  12.6 12.1 3.6 -7.6 91.5 89.1 -16.3
 GLY-340   SER-341  11.2 10.4 6.6 2.7 103.4 112.9 -20.8
 SER-341   LEU-342  7.7 7.0 2.0 -10.7 44.8 46.8 -23.6
 LEU-342   PRO-343  4.2 3.5 2.5 -6.9 102.9 104.9 16.6
 PRO-343   VAL-344  4.4 3.7 4.0 5.3 123.4 117.4 -46.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-354   ALA-355  9.8 9.2 -1.6 6.8 82.6 83.4 -7.5
 ALA-355   CYS-356  10.4 10.5 -10.6 -2.0 22.8 30.7 73.3
 CYS-356   THR-357  11.2 10.9 3.2 5.9 117.8 111.3 -20.8
 THR-357   GLN-358  7.7 7.3 -1.0 -2.2 114.0 115.5 4.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees