5-Aminolevulinate Synthase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-314   LYS-315  3.9 3.7 3.8 -5.9 64.6 65.5 20.9
 LYS-315   MET-316  3.7 3.5 1.5 4.9 71.8 75.7 -8.8
 MET-316   ARG-317  6.9 6.8 -0.5 1.2 42.0 37.2 23.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-324   ILE-325  11.9 12.0 -36.3 27.9 88.8 78.1 -8.1
 ILE-325   ILE-326  8.6 8.7 5.5 -18.1 136.5 145.1 151.1
 ILE-326   ASP-327  9.2 9.3 16.1 -8.2 113.3 113.3 -45.1
 ASP-327   HIS-328  6.2 6.3 0.1 3.1 146.3 149.7 -52.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-332   VAL-333  6.1 6.4 -7.4 5.2 92.2 90.6 -27.5
 VAL-333   PRO-334  4.2 4.5 -4.1 0.3 55.1 52.9 27.9
 PRO-334   VAL-335  7.5 7.8 12.1 -13.6 92.4 96.4 111.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-373   ARG-374  8.7 8.9 0.8 -13.6 138.5 142.1 98.2
 ARG-374   PHE-375  7.6 7.7 -9.4 17.5 108.0 101.2 30.2
 PHE-375   THR-376  4.4 4.3 -2.8 0.7 51.4 49.7 -5.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees