Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-518
MET-519
11.3
11.5
-5.1
15.5
107.9
105.0
9.8
MET-519
THR-520
7.8
8.1
-8.7
-9.3
30.5
23.1
57.1
THR-520
LEU-521
5.9
7.1
-28.9
16.1
106.0
99.6
-39.6
LEU-521
GLY-522
2.5
4.3
21.7
-18.8
151.5
147.9
-6.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-745
SER-746
3.5
3.0
-127.8
93.6
44.7
51.7
92.4
SER-746
LYS-747
3.8
4.6
1.2
7.1
77.9
85.6
26.2
LYS-747
GLY-748
4.4
4.4
-13.5
0.5
27.3
31.3
41.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TRP-783
TRP-784
4.1
4.0
3.3
2.8
105.5
108.2
-14.5
TRP-784
ARG-785
1.4
1.3
-115.0
7.4
144.1
141.5
-339.7
ARG-785
GLY-786
1.9
1.7
164.3
135.3
81.7
87.8
123.7
GLY-786
ASN-787
5.5
4.1
82.8
-65.4
75.0
40.2
90.4
ASN-787
GLY-788
8.7
7.2
-94.9
-168.2
136.9
93.4
420.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees