6-Phosphogluconate Dehydrogenase, Decarboxylating

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-99   GLY-100  6.0 5.8 3.5 -2.5 43.6 42.8 23.2
 GLY-100   GLY-101  5.3 5.3 4.4 4.1 91.7 91.9 9.0
 GLY-101   ASN-102  7.3 7.3 -0.1 -9.7 79.3 84.7 3.8
 ASN-102   THR-103  7.9 7.8 8.8 -12.0 172.7 169.3 6.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-110   ARG-111  0.4 0.2 -3.2 -0.1 72.1 76.5 29.2
 ARG-111   ASN-112  3.5 3.5 -1.1 1.1 76.4 79.6 2.3
 ASN-112   ARG-113  4.3 4.5 -3.3 -1.5 146.1 147.7 -23.6
 ARG-113   GLU-114  5.2 5.2 2.3 -0.5 68.8 59.6 31.2
 GLU-114   LEU-115  6.3 5.9 6.6 0.0 122.4 115.4 -14.0
 LEU-115   SER-116  8.7 8.6 -1.4 4.3 84.8 92.2 21.5
 SER-116   ALA-117  9.8 9.8 0.5 -2.3 33.3 29.8 -34.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-121   PHE-122  11.8 10.7 37.9 -28.7 71.2 71.6 89.7
 PHE-122   ILE-123  8.1 7.2 -18.6 17.5 126.7 128.5 52.5
 ILE-123   GLY-124  5.6 5.4 -3.2 4.6 92.6 99.0 -5.8
 GLY-124   THR-125  2.0 1.7 5.4 -1.5 32.1 25.9 30.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-126   VAL-127  2.6 2.5 0.7 1.9 153.1 155.3 -17.6
 VAL-127   SER-128  3.4 3.3 -8.3 12.6 65.1 63.3 -1.0
 SER-128   GLY-129  5.6 5.5 6.7 -16.4 167.3 162.8 70.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-139   ILE-140  2.1 2.1 -1.8 5.7 26.3 25.3 -38.7
 ILE-140   MET-141  1.2 1.4 -1.6 4.5 55.7 52.5 -42.9
 MET-141   PRO-142  3.3 3.3 -4.6 -3.1 27.7 30.0 81.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-143   GLY-144  5.2 5.4 -11.2 7.4 129.7 131.4 -38.7
 GLY-144   GLN-145  6.8 6.9 10.3 2.3 85.9 86.7 28.5
 GLN-145   LYS-146  10.4 10.6 -11.5 -0.8 22.3 24.7 85.9
 LYS-146   GLU-147  12.6 12.7 -4.6 -5.8 77.9 69.9 64.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-159   ALA-160  6.8 6.8 1.0 0.7 85.5 86.3 0.4
 ALA-160   ALA-161  3.5 3.6 -2.0 0.0 158.9 155.2 2.1
 ALA-161   VAL-162  1.3 1.3 -4.7 12.5 101.2 104.2 69.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees