Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-106
THR-107
6.4
6.5
-6.4
7.0
33.8
35.2
-36.6
THR-107
LEU-108
4.2
4.3
2.4
1.1
70.0
70.8
41.2
LEU-108
GLY-109
1.1
1.1
-9.6
7.1
34.0
33.1
14.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-212
SER-213
3.9
3.8
-4.2
2.1
57.3
59.1
58.2
SER-213
LYS-214
1.2
1.2
-3.8
5.3
89.2
86.8
10.3
LYS-214
GLY-215
2.6
2.5
1.5
4.5
149.4
147.2
-163.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees