Abc Transporter, Atp Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-35   ILE-36  14.9 14.9 -6.4 5.8 161.9 163.1 -8.7
 ILE-36   LEU-37  14.2 14.4 -8.1 4.0 89.8 89.1 31.1
 LEU-37   GLY-38  11.9 11.8 -26.2 17.8 167.4 162.7 -98.8
 GLY-38   PRO-39  11.6 11.9 -2.8 -3.2 104.4 95.3 -34.9
 PRO-39   SER-40  12.8 13.3 -175.5 50.9 105.2 111.5 -531.4
 SER-40   GLY-41  15.8 16.9 28.8 144.0 130.7 18.5 638.5
 GLY-41   ALA-42  18.7 17.4 43.9 -5.6 61.4 78.3 422.2
 ALA-42   GLY-43  20.8 14.6 28.3 173.4 82.4 79.9 212.9
 GLY-43   LYS-44  18.7 17.7 64.1 -5.6 146.7 149.3 -712.4
 LYS-44   THR-45  18.3 18.3 -8.4 0.8 77.6 80.3 49.0
 THR-45   THR-46  22.0 22.0 1.4 -0.9 54.1 53.2 5.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-226   ASP-227  4.7 4.7 -6.9 3.2 136.0 142.5 -28.0
 ASP-227   LEU-228  6.3 6.5 4.7 -6.8 36.3 37.3 12.4
 LEU-228   TYR-229  4.5 4.5 2.3 -5.9 103.1 102.1 -25.5
 TYR-229   ASP-230  1.3 1.3 -0.5 1.9 96.9 95.1 21.7
 ASP-230   ASN-231  3.7 4.0 -6.2 3.9 148.5 151.4 -44.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-235   GLN-236  3.3 3.2 -4.4 0.9 83.8 82.3 -1.0
 GLN-236   VAL-237  4.3 4.0 1.2 -6.6 141.8 143.1 39.8
 VAL-237   ALA-238  3.4 3.2 5.8 2.7 145.8 145.6 -49.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees