DNA Repair Protein Xrcc4

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-125   LEU-126  26.4 26.5 7.9 -4.4 91.6 86.9 -5.3
 LEU-126   ILE-127  24.2 24.5 -4.7 4.3 95.2 99.2 -13.9
 LEU-131   ASP-132  16.9 16.6 17.7 -10.4 166.5 167.6 -24.7
 ASP-132   THR-133  17.3 17.1 7.4 -5.9 102.5 103.6 -11.7
 THR-133   THR-134  15.8 15.7 13.2 -9.6 73.1 73.4 -11.8
 THR-134   ALA-135  12.7 12.6 0.1 -1.6 126.4 129.7 4.3
 ALA-135   GLU-136  12.2 12.3 -5.2 -0.9 28.7 31.8 27.0
 GLU-136   ASN-137  12.2 12.3 9.5 -3.6 85.6 84.6 0.8
 ASN-137   GLN-138  10.2 10.4 -4.2 -6.5 103.0 96.7 -1.5
 GLN-138   ALA-139  7.6 7.4 19.0 -15.7 150.9 150.4 -7.6
 ALA-139   LYS-140  7.6 7.5 11.5 -12.6 119.9 121.6 3.0
 LYS-140   ASN-141  7.1 7.3 11.6 3.6 70.1 69.1 21.4
 ASN-141   GLU-142  4.8 5.1 17.6 -22.0 99.7 110.2 -5.6
 GLU-142   HIS-143  2.8 2.4 -7.2 11.9 17.9 18.3 -17.9
 HIS-143   LEU-144  2.8 3.1 -13.3 -2.6 78.0 84.8 10.1
 LEU-144   GLN-145  3.0 4.7 6.6 2.3 73.2 68.1 3.3
 GLN-145   LYS-146  2.4 3.2 3.9 -21.4 130.6 131.5 39.5
 LYS-146   GLU-147  2.7 2.6 -1.4 4.1 41.9 43.5 -14.3
 GLU-147   ASN-148  3.0 4.3 8.1 2.9 76.3 71.1 8.8
 ASN-148   GLU-149  6.2 7.1 7.4 -15.2 87.8 96.6 -4.8
 GLU-149   ARG-150  7.0 7.3 -2.9 1.6 23.8 16.6 1.9
 ARG-150   LEU-151  7.1 7.0 -2.7 -6.1 70.8 74.3 18.1

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees