4-Hydroxy-Tetrahydrodipicolinate Reductase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-103   PRO-104  9.0 9.4 -7.6 5.3 62.2 58.8 1.8
 PRO-104   ASN-105  9.1 10.0 -0.5 -3.0 50.6 53.5 16.7
 ASN-105   PHE-106  5.9 6.8 -1.5 9.4 77.2 83.3 -16.4
 PHE-106   ALA-107  4.0 4.4 1.2 -12.4 110.6 105.0 23.1
 ALA-107   ILE-108  1.3 2.3 14.1 -2.4 44.0 36.8 19.8
 ILE-108   GLY-109  2.1 2.1 4.5 1.3 65.2 61.8 11.0
 GLY-109   ALA-110  4.7 5.4 3.9 -3.7 51.9 51.7 -0.1
 ALA-110   VAL-111  4.5 5.5 -0.1 2.8 150.1 144.1 10.1
 VAL-111   LEU-112  1.6 2.5 -0.4 1.3 125.6 130.6 -1.5
 LEU-112   SER-113  4.4 4.5 4.1 -0.6 66.3 61.4 5.2
 SER-113   MET-114  6.8 7.1 1.7 -4.3 35.0 33.7 1.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-213   ASP-214  9.5 9.8 -25.0 16.6 133.0 133.5 -24.7
 ASP-214   ARG-215  7.0 7.1 0.5 -1.4 124.1 120.6 -6.5
 ARG-215   THR-216  7.0 6.2 3.9 42.1 101.4 89.8 -33.9
 THR-216   SER-217  3.5 2.4 -43.1 6.6 52.9 26.0 98.2
 SER-217   PHE-218  2.2 2.4 -7.3 -14.5 41.0 53.1 38.3
 PHE-218   VAL-219  2.2 3.7 0.6 -7.5 73.5 78.8 -20.9
 VAL-219   PRO-220  3.5 4.1 -6.4 3.9 60.6 54.2 3.4
 PRO-220   GLY-221  4.7 4.6 -12.0 13.0 25.1 29.4 3.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-240   PRO-241  4.0 3.6 -0.3 -10.9 112.3 113.1 -16.7
 PRO-241   LEU-242  7.5 7.2 17.1 -14.5 134.1 127.7 38.3
 LEU-242   LEU-243  9.1 8.6 18.2 -42.3 104.6 95.8 3.2
 LEU-243   ASP-244  7.8 7.0 178.8 -165.6 53.0 32.1 58.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees