Redox-Sensing Transcriptional Repressor Rex 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-78   VAL-79  5.3 6.0 -23.0 3.5 69.7 59.6 55.9
 VAL-79   LYS-80  1.7 2.5 -6.7 6.9 18.0 9.9 -3.0
 LYS-80   LYS-81  2.8 4.1 0.4 -21.4 94.8 105.5 20.3
 LYS-81   GLU-82  5.9 6.5 8.4 0.7 81.3 81.1 22.4
 GLU-82   TRP-83  7.5 7.7 -16.7 17.6 124.1 121.1 18.9

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees