Periplasmic Oligopeptide-Binding Protein
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-43
GLN-44
5.7
5.7
5.2
-4.3
106.4
106.7
-111.9
GLN-44
SER-45
8.9
9.0
-2.1
1.3
55.4
57.7
49.5
SER-45
PHE-46
8.5
8.4
-2.6
-0.6
71.9
71.6
-210.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-53
VAL-54
7.1
7.1
-0.6
5.4
86.7
86.8
-35.8
VAL-54
PRO-55
5.5
5.6
-4.1
4.3
66.3
67.5
105.0
PRO-55
GLU-56
2.6
2.7
-4.7
1.7
137.5
135.0
-48.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-62
LEU-63
7.6
7.7
2.2
1.2
126.9
127.0
-141.5
LEU-63
LEU-64
8.0
8.2
-5.1
4.9
4.4
4.7
0.0
LEU-64
GLU-65
6.6
6.7
-3.4
8.6
75.8
76.8
16.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-67
VAL-68
7.2
7.4
-6.4
7.4
69.0
68.2
-55.5
VAL-68
THR-69
9.9
9.9
-3.6
-1.3
10.6
10.2
141.0
THR-69
SER-70
10.7
10.6
-2.3
1.5
71.3
69.4
166.3
SER-70
ASP-71
13.3
13.4
-5.4
5.0
45.8
47.0
-13.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-74
LYS-75
15.9
16.0
11.5
-5.9
163.4
161.6
-145.0
LYS-75
LEU-76
17.6
17.8
2.0
4.6
122.2
121.7
-151.6
LEU-76
GLN-77
15.5
15.5
-3.3
6.3
70.7
73.0
118.0
GLN-77
PRO-78
15.6
15.6
-2.4
3.6
63.3
59.8
244.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-129
TYR-130
12.3
12.3
-1.1
-4.6
123.5
122.6
-234.8
TYR-130
ALA-131
10.2
10.3
10.6
-6.8
11.2
10.4
133.1
ALA-131
SER-132
11.3
11.4
-0.8
5.2
121.2
120.5
108.3
SER-132
TYR-133
13.0
13.1
-6.5
0.1
99.6
101.4
-75.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-184
LEU-185
3.9
3.8
2.7
-9.7
25.8
28.4
-134.9
LEU-185
LEU-186
2.1
2.0
4.9
-1.3
95.2
94.5
165.4
LEU-186
PRO-187
1.5
1.7
1.2
2.2
51.1
51.7
41.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-419
GLU-420
15.2
15.1
-5.9
5.1
76.8
77.0
144.2
GLU-420
TRP-421
12.0
11.8
3.9
-0.5
161.4
162.2
-226.1
TRP-421
LYS-422
10.2
10.1
-2.0
1.7
40.8
44.3
6.9
LYS-422
THR-423
11.7
11.5
-1.8
5.3
90.1
93.5
84.8
LYS-422
THR-423
11.7
11.5
-1.8
5.3
90.1
93.5
84.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-422
THR-423
11.7
11.5
-1.8
5.3
90.1
93.5
84.8
LYS-422
THR-423
11.7
11.5
-1.8
5.3
90.1
93.5
84.8
THR-423
TYR-424
15.1
15.0
-8.0
8.0
102.4
104.1
24.7
TYR-424
ILE-425
15.1
15.0
0.1
-4.2
10.6
10.5
-122.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees