5'-Nucleotidase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-351   PHE-352  9.3 9.2 -7.7 2.6 15.5 14.0 -0.5
 PHE-352   GLN-353  10.3 10.2 -2.0 1.4 61.2 58.6 10.3
 GLN-353   ASN-354  8.7 8.9 5.0 -29.3 80.7 87.5 0.1
 ASN-354   LYS-355  5.4 5.4 41.5 1.6 118.7 101.0 -17.3
 LYS-355   GLY-356  6.3 5.7 156.1 131.2 165.5 140.2 77.2
 GLY-356   LYS-357  6.2 3.5 63.0 13.0 103.3 110.7 -12.2
 LYS-357   ALA-358  3.2 1.6 -6.9 6.1 93.5 70.4 2.9
 ALA-358   GLN-359  2.2 2.5 -7.1 -2.6 34.9 25.5 5.2
 GLN-359   LEU-360  4.7 3.2 -19.2 2.9 37.3 39.0 20.7
 LEU-360   GLU-361  1.7 0.0 -8.5 -1.7 82.8 75.8 3.5
 GLU-361   VAL-362  3.4 3.8 -6.4 9.1 77.1 75.0 5.0

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees