Uvrabc System Protein B

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ALA-394   THR-395  5.7 5.6 16.0 -15.0 80.9 80.8 24.2  THR-395   PRO-396  8.5 8.4 1.6 10.5 8.3 10.5 89.0  PRO-396   GLY-397  7.9 7.8 1.2 -3.5 72.3 71.5 -54.8  GLY-397   PRO-398  11.1 11.1 -1.8 6.1 129.2 125.5 -5.4  PRO-398   TYR-399  12.4 12.6 -6.5 -0.8 151.4 144.6 -31.2  TYR-399   GLU-400  10.8 10.8 11.6 -8.9 96.1 98.2 -30.0 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  GLU-409   GLN-410  4.3 4.3 -22.1 24.6 59.6 58.7 -38.9  GLN-410   ILE-411  3.4 3.4 -2.1 -4.5 30.6 33.5 92.2  ILE-411   ILE-412  2.8 2.4 28.0 -25.7 140.1 145.8 -0.6  ILE-412   ARG-413  4.8 4.6 8.1 -9.3 89.3 98.0 -41.4  ARG-413   PRO-414  5.0 5.4 -8.6 10.9 67.9 64.6 -53.1  PRO-414   THR-415  8.6 9.1 17.5 -46.3 167.9 174.6 225.4  THR-415   GLY-416  8.0 8.3 31.2 -15.5 121.5 111.9 -84.7  GLY-416   LEU-417  5.7 5.7 5.3 -0.7 110.8 105.8 -70.4 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees