Serine/threonine-Protein Kinase Pak 6

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-495   VAL-496  3.9 3.9 4.8 3.3 121.6 98.9 3.7
 VAL-496   ILE-497  6.0 5.6 8.0 7.0 61.0 37.7 74.1
 ILE-497   MET-498  8.3 7.1 -12.9 32.9 123.3 122.3 69.6
 MET-498   ARG-499  6.1 4.2 -23.7 -7.7 74.9 58.6 221.6
 ARG-499   ASP-500  4.2 4.6 -10.0 24.8 97.8 94.7 24.5
 ASP-500   TYR-501  7.9 8.3 -30.2 -22.1 141.4 151.9 -253.9
 TYR-501   HIS-502  8.8 8.9 -40.1 43.8 135.9 133.7 -37.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-507   ASP-508  1.8 1.7 -1.0 -11.1 152.5 152.2 -76.1
 ASP-508   MET-509  3.6 3.4 6.2 10.4 46.6 53.5 91.2
 MET-509   TYR-510  2.2 2.6 7.0 -2.2 49.9 62.5 14.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-524   PHE-525  5.2 5.7 4.8 6.3 56.5 51.3 101.7
 PHE-525   LEU-526  6.8 7.1 9.9 -7.0 26.0 31.5 18.2
 LEU-526   GLU-527  4.8 5.2 8.0 8.0 49.5 45.2 63.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees