Bifunctional Udp-N-Acetylglucosamine 2-Epimerase/n- Acetylmannosamine Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-515   ASN-516  7.6 7.8 -1.9 23.8 77.8 83.3 -118.0
 ASN-516   ASP-517  7.3 7.1 -17.7 -8.2 16.3 11.5 248.7
 ASP-517   GLY-518  8.5 8.8 4.3 -5.0 116.0 125.0 -57.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-525   ARG-526  2.0 2.1 9.2 -9.4 84.8 80.8 44.2
 ARG-526   LYS-527  3.7 3.4 2.1 0.2 58.7 56.2 2.6
 LYS-527   PHE-528  6.6 6.3 11.9 -9.1 23.0 23.3 47.0
 PHE-528   GLY-529  6.0 5.8 -2.5 -10.1 115.5 115.1 -70.3
 GLY-529   GLN-530  2.6 2.4 -1.5 2.0 105.0 101.5 2.6
 GLN-530   GLY-531  1.2 1.4 -15.5 9.6 45.8 49.8 33.9
 GLY-531   LYS-532  2.9 2.6 10.3 -15.9 79.6 81.6 9.7
 LYS-532   GLY-533  5.4 4.7 3.7 -10.0 96.3 97.8 4.8
 LYS-532   GLY-533  5.4 4.7 3.7 -10.0 96.3 97.8 4.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-532   GLY-533  5.4 4.7 3.7 -10.0 96.3 97.8 4.8
 LYS-532   GLY-533  5.4 4.7 3.7 -10.0 96.3 97.8 4.8
 GLY-533   LEU-534  8.7 8.1 46.2 -41.1 46.5 63.8 23.9
 LEU-534   GLU-535  8.3 8.0 3.7 12.3 19.2 18.6 36.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-556   ILE-557  4.4 4.0 -3.0 -1.4 37.5 35.0 29.2
 ILE-557   HIS-558  4.8 4.5 7.6 -11.1 124.6 124.1 43.9
 HIS-558   GLY-559  2.7 2.2 17.8 -13.2 141.8 142.9 -39.3
 GLY-559   SER-560  3.9 4.2 7.8 -2.7 151.0 150.5 -50.4
 SER-560   SER-561  4.6 4.9 20.6 -39.1 114.8 118.7 21.5
 SER-561   PHE-562  1.2 1.3 10.5 -7.1 44.4 49.6 13.5
 PHE-562   CYS-563  0.8 0.6 45.4 -21.3 123.1 105.0 -76.8
 PHE-562   CYS-563  0.8 0.6 45.4 -21.3 123.1 105.0 -76.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-562   CYS-563  0.8 0.6 45.4 -21.3 123.1 105.0 -76.8
 PHE-562   CYS-563  0.8 0.6 45.4 -21.3 123.1 105.0 -76.8
 CYS-563   ALA-564  3.1 3.8 -41.1 13.4 61.6 44.9 123.9
 ALA-564   ALA-565  3.9 4.4 -11.6 5.9 37.1 41.1 23.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-699   ASP-700  6.9 7.4 -7.2 5.6 136.9 143.4 -35.6
 ASP-700   LEU-701  7.1 7.0 21.0 -23.9 113.1 108.9 126.5
 LEU-701   VAL-702  7.9 8.2 8.6 27.2 105.4 103.8 18.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees