Retinoic Acid Receptor Rxr-Alpha
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-308
GLU-309
19.6
12.1
60.2
-63.1
51.3
77.9
-4.4
GLU-309
LEU-310
17.5
10.1
127.9
53.6
108.3
16.2
-57.1
LEU-310
VAL-311
14.8
9.1
26.0
-7.8
155.2
77.8
-6.4
VAL-311
SER-312
15.2
8.7
24.3
-9.5
96.0
101.8
-7.8
SER-312
LYS-313
19.0
12.2
-2.6
-54.4
122.9
136.3
120.4
LYS-313
MET-314
19.2
13.9
33.7
10.7
113.7
18.3
-83.4
MET-314
ARG-315
17.1
11.9
0.1
-3.3
143.9
39.4
2.3
ARG-315
ASP-316
19.0
13.8
24.3
-2.2
77.8
85.5
-9.5
ASP-316
MET-317
22.4
17.0
33.5
-33.2
75.8
54.7
4.9
MET-317
GLN-318
22.1
15.8
31.4
-107.2
127.1
27.5
-20.6
GLN-318
MET-319
20.4
14.8
81.9
126.9
61.3
53.1
92.1
MET-319
ASP-320
17.9
15.0
-128.3
19.7
48.6
70.7
25.5
ASP-320
LYS-321
17.3
16.5
-4.7
-23.8
106.9
92.4
-105.0
LYS-321
THR-322
14.5
16.2
140.9
-35.5
42.4
175.2
66.4
THR-322
GLU-323
16.5
14.6
-176.6
-42.2
151.5
69.0
-67.3
GLU-323
LEU-324
16.2
15.4
173.8
-59.6
82.1
144.1
72.2
LEU-324
GLY-325
12.6
13.2
174.5
-43.2
70.4
116.0
18.5
GLY-325
CYS-326
12.0
15.0
168.1
-164.7
14.9
125.4
-3.9
CYS-326
LEU-327
13.9
13.8
-154.8
-67.3
125.8
123.5
-93.2
LEU-327
ARG-328
11.7
13.5
62.6
-47.1
88.6
110.7
-3.5
ARG-328
ALA-329
8.5
10.8
-134.0
7.2
124.0
115.9
-27.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees