Tryptophanyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-145   VAL-146  2.9 2.7 -5.7 1.6 63.7 61.7 -12.3
 VAL-146   LEU-147  0.4 0.3 4.8 -7.0 118.1 115.2 -31.1
 LEU-147   ASP-148  3.4 3.5 14.7 -6.1 50.7 48.0 81.8
 ASP-148   ALA-149  5.7 5.5 -7.4 8.1 105.8 99.0 -51.1
 ALA-149   TYR-150  5.2 5.2 1.3 -2.7 138.2 142.1 10.5
 TYR-150   GLU-151  6.2 6.3 6.3 -9.7 100.7 97.7 -2.0
 GLU-151   ASN-152  8.5 8.7 8.8 -7.1 47.2 46.8 -0.8
 ASN-152   LYS-153  10.1 10.2 2.0 -8.3 84.7 90.3 -34.0
 LYS-153   LYS-154  11.0 11.2 5.4 -8.0 54.8 56.2 -52.8
 LYS-154   PRO-155  8.7 8.9 -26.4 7.2 49.7 52.1 150.1
 PRO-155   PHE-156  8.8 8.4 23.8 -5.7 77.1 68.0 33.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-303   GLN-304  9.3 9.0 -11.7 -12.6 116.1 108.2 -187.0
 GLN-304   CYS-305  6.4 6.4 -2.1 22.6 135.8 147.5 381.5
 CYS-305   LEU-306  8.1 8.2 4.1 1.2 57.1 59.6 -45.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-321   ASP-322  12.5 12.6 -8.7 6.4 160.5 164.0 -59.3
 ASP-322   VAL-323  14.5 14.3 -0.6 -0.4 126.9 129.4 -20.9
 VAL-323   ALA-324  15.2 14.9 7.0 -4.5 80.7 84.9 40.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-330   LYS-331  7.2 6.7 -2.9 0.5 128.5 125.9 -89.4
 LYS-331   PRO-332  8.2 8.1 7.5 -5.5 16.7 16.0 2.8
 PRO-332   ALA-333  8.8 8.6 9.7 -6.5 61.5 62.4 59.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-334   LEU-335  8.9 9.1 10.0 -5.7 143.7 138.1 -55.0
 LEU-335   HIS-336  8.9 9.1 0.1 4.0 113.6 114.8 -10.7
 HIS-336   SER-337  12.4 12.6 -5.6 10.5 14.5 14.7 -107.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees