Glutamyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-260   PHE-261  8.3 8.4 7.4 11.7 65.4 62.4 49.3
 PHE-261   LEU-262  6.4 6.5 5.0 -9.2 96.1 98.9 -33.0
 LEU-262   PRO-263  7.8 8.1 4.2 8.3 26.2 25.2 72.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-264   ALA-265  10.3 10.6 3.6 -6.0 112.3 111.7 49.9
 ALA-265   LEU-266  6.7 7.0 2.8 -1.6 158.1 151.6 -14.4
 LEU-266   ARG-267  6.3 6.6 -5.4 7.8 45.4 46.2 -6.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-270   CYS-271  6.4 6.7 -0.6 8.4 115.8 114.8 58.3
 CYS-271   LEU-272  9.3 9.4 -23.8 24.2 109.8 113.3 7.8
 LEU-272   MET-273  7.9 7.7 -10.3 11.9 144.3 142.8 -22.4
 MET-273   GLY-274  5.5 5.4 4.1 -35.8 37.9 45.0 -168.2
 GLY-274   PHE-275  7.6 7.6 84.9 -53.3 100.6 103.3 43.4
 PHE-275   SER-276  10.9 11.1 -37.1 36.2 36.2 43.6 50.2
 SER-276   MET-277  13.1 13.3 -16.3 0.7 78.4 72.7 14.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-280   ARG-281  16.9 16.8 4.7 -5.1 145.5 139.0 22.5
 ARG-281   GLU-282  15.6 15.2 -17.2 -3.4 104.6 102.5 8.0
 GLU-282   ILE-283  11.8 11.4 36.5 -32.2 122.7 132.5 15.3
 ILE-283   PHE-284  11.6 11.9 8.6 -72.3 86.7 89.8 -272.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-291   ALA-292  22.0 21.8 0.9 14.2 60.3 66.8 114.1
 ALA-292   PHE-293  20.3 19.9 -20.7 21.5 151.5 156.1 27.5
 PHE-293   THR-294  18.5 18.3 -22.9 7.0 146.9 150.4 -191.8
 THR-294   TRP-295  19.1 18.6 -6.5 7.2 128.7 126.6 76.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-305   ASP-306  2.2 1.7 -31.4 5.9 49.8 54.1 88.1
 ASP-306   LEU-307  3.9 3.8 22.1 -22.8 159.6 153.8 -12.2
 LEU-307   GLU-308  4.5 4.0 6.1 -2.1 136.2 142.2 -57.8
 GLU-308   LYS-309  5.7 5.5 7.7 -0.3 80.5 81.7 15.0
 GLU-308   LYS-309  5.7 5.5 7.7 -0.3 80.5 81.7 15.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-308   LYS-309  5.7 5.5 7.7 -0.3 80.5 81.7 15.0
 GLU-308   LYS-309  5.7 5.5 7.7 -0.3 80.5 81.7 15.0
 LYS-309   LEU-310  4.3 4.0 -3.2 -2.4 113.1 115.4 7.4
 LEU-310   ARG-311  0.6 0.5 3.0 -11.0 9.0 5.6 -102.2
 ARG-311   TRP-312  2.0 1.6 7.8 -1.4 61.4 68.6 76.8
 TRP-312   MET-313  4.1 4.1 1.5 -3.1 81.7 82.3 -2.1
 TRP-312   MET-313  4.1 4.1 1.5 -3.1 81.7 82.3 -2.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-312   MET-313  4.1 4.1 1.5 -3.1 81.7 82.3 -2.1
 TRP-312   MET-313  4.1 4.1 1.5 -3.1 81.7 82.3 -2.1
 MET-313   ASN-314  4.1 4.2 -2.1 -3.6 134.5 135.9 5.8
 ASN-314   GLY-315  2.4 2.8 5.7 -4.4 23.3 22.8 21.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-316   TYR-317  6.1 6.4 7.0 -1.1 109.8 107.9 4.5
 TYR-317   ILE-318  6.8 7.1 13.6 -15.5 163.4 165.3 1.4
 ILE-318   ARG-319  5.0 5.3 -4.6 -0.4 46.6 49.6 23.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees