Antibody 19G2, Beta Chain

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-112   ARG-113  5.5 5.4 -16.7 20.5 137.6 140.1 12.6
 ARG-113   ALA-114  3.6 3.6 -1.4 4.1 127.8 128.8 36.4
 ALA-114   ASP-115  1.2 1.6 -5.9 4.5 68.2 67.5 7.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-170   GLN-171  4.1 4.3 -11.4 1.8 19.9 18.9 90.6
 GLN-171   ASP-172  3.7 3.7 6.0 -9.5 94.6 97.3 28.2
 ASP-172   SER-173  7.3 7.2 1.2 2.3 97.4 97.9 48.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-175   SER-176  8.5 8.1 19.4 -5.4 93.6 101.5 51.6
 SER-176   THR-177  5.4 4.9 12.5 2.2 84.0 81.4 15.9
 THR-177   TYR-178  4.5 4.3 -0.2 -3.9 26.7 23.4 29.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees