Sec1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-294   VAL-295  5.1 5.2 -23.9 18.9 56.6 56.1 4.3
 VAL-295   VAL-296  5.6 5.7 -7.7 1.3 38.5 41.0 59.3
 VAL-296   SER-297  7.9 7.8 -5.1 8.7 90.7 88.1 -15.4
 SER-297   GLN-298  11.1 11.3 -2.5 3.9 86.0 80.4 -18.9
 GLN-298   ASN-299  10.1 10.5 3.6 -17.8 159.5 161.9 105.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-342   SER-343  16.4 16.5 -42.2 -9.0 49.8 41.9 251.8
 SER-343   THR-344  19.6 19.5 5.9 4.5 109.7 112.5 -35.8
 THR-344   HIS-345  19.3 18.9 -4.4 1.7 67.9 64.4 0.8
 HIS-345   LEU-346  15.6 15.2 12.6 -10.1 160.8 156.9 -10.5
 LEU-346   HIS-347  15.8 16.1 0.8 -6.0 125.9 126.7 11.6
 HIS-347   LEU-348  18.7 18.5 -10.6 11.8 79.9 80.1 13.3
 LEU-348   ALA-349  16.6 16.3 4.7 -0.9 136.8 137.6 -25.3
 ALA-349   GLU-350  13.5 13.4 -2.7 2.7 26.9 28.1 3.8
 GLU-350   ASP-351  15.9 16.1 -11.0 6.5 66.9 69.4 29.0
 ASP-351   CYS-352  17.8 17.7 3.0 -0.5 114.5 112.3 -5.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees