Transcriptional Regulator (Ntrc Family)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-152   ILE-153  12.9 12.8 7.9 -11.9 131.7 128.6 33.0
 ILE-153   LYS-154  9.8 9.8 -1.4 -1.7 19.5 19.6 25.0
 LYS-154   LYS-155  11.8 11.9 3.3 0.1 106.4 114.8 -23.4
 LYS-155   ILE-156  13.5 13.4 -27.9 36.6 87.5 81.2 7.2
 ILE-156   SER-157  10.5 10.5 -22.3 38.4 40.6 35.1 -122.8
 SER-157   CYS-158  7.8 7.7 -45.4 38.9 31.9 34.5 32.6
 CYS-158   ALA-159  10.2 9.7 -1.4 -20.2 93.4 97.6 144.0
 CYS-158   ALA-159  10.2 9.7 -1.4 -20.2 93.4 97.6 144.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-158   ALA-159  10.2 9.7 -1.4 -20.2 93.4 97.6 144.0
 CYS-158   ALA-159  10.2 9.7 -1.4 -20.2 93.4 97.6 144.0
 ALA-159   GLU-160  10.8 9.9 -51.4 42.7 81.4 105.2 44.3
 GLU-160   CYS-161  9.7 8.8 59.7 -43.1 41.3 44.2 93.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-166   GLY-167  3.3 3.5 -9.4 12.6 63.7 66.5 -48.3
 GLY-167   GLU-168  1.8 2.2 4.0 -13.4 117.4 118.9 -1.5
 GLU-168   SER-169  2.1 2.0 2.5 12.9 52.4 53.4 90.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-174   VAL-175  4.5 4.3 2.5 -3.5 126.2 124.5 3.9
 VAL-175   VAL-176  6.6 6.6 -5.3 3.1 67.1 61.4 -21.6
 VAL-176   ALA-177  4.9 5.1 -17.3 13.6 43.8 45.7 19.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-180   HIS-181  4.7 4.7 16.3 -20.3 23.3 27.1 -36.2
 HIS-181   LYS-182  2.6 2.7 1.4 5.3 47.7 50.6 73.8
 LYS-182   LEU-183  6.0 6.1 6.3 -7.8 70.9 64.6 -14.1
 LEU-183   SER-184  7.7 7.3 -15.8 26.1 116.7 119.4 31.3
 SER-184   ASP-185  5.9 5.3 -14.0 -1.1 173.8 171.5 -136.3
 ASP-185   ARG-186  5.6 5.5 35.6 -43.3 74.0 69.8 13.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-307   PRO-308  6.0 6.3 18.5 -28.5 161.2 170.1 78.8
 PRO-308   PRO-309  7.7 7.9 -10.9 22.2 76.7 72.4 -25.7
 PRO-309   LEU-310  7.6 7.5 -13.2 -10.2 89.8 94.5 6.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees