Gsy2p

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-199   TYR-200  2.6 2.9 -7.5 0.7 154.2 154.2 -36.0
 TYR-200   LEU-201  3.2 3.4 11.1 -4.0 68.5 67.0 32.7
 LEU-201   CYS-202  1.3 0.8 -13.8 20.7 63.6 69.1 4.4
 CYS-202   ALA-203  4.0 3.7 -15.6 13.0 96.9 107.5 -12.3
 ALA-203   SER-204  6.2 5.9 -7.3 21.5 138.7 146.1 73.3
 SER-204   GLY-205  7.2 6.2 118.6 118.1 89.5 94.1 -164.1
 GLY-205   SER-206  9.0 7.8 142.8 51.1 123.2 38.8 299.6
 SER-206   PHE-207  10.0 6.8 -52.1 -105.2 101.2 81.8 175.5
 PHE-207   ASP-208  7.7 8.3 46.7 3.2 149.9 168.0 -386.8
 ASP-208   PHE-209  10.1 10.0 8.0 3.4 114.6 110.6 8.7
 PHE-209   TYR-210  7.4 7.1 8.5 -6.1 128.6 132.0 -23.7
 TYR-210   ASN-211  9.6 9.2 -21.4 12.1 106.3 99.4 -21.9
 ASN-211   CYS-212  12.8 12.6 18.7 -3.4 40.3 37.1 158.1
 CYS-212   LEU-213  11.8 11.6 -33.6 9.0 93.7 99.5 -154.8
 LEU-213   GLU-214  9.6 9.3 -6.5 4.4 103.2 107.3 -26.2
 GLU-214   SER-215  13.1 12.6 -2.0 10.0 170.1 169.5 73.2
 SER-215   VAL-216  12.0 12.2 -21.7 15.4 107.5 119.0 -10.6
 VAL-216   ASP-217  8.9 9.0 9.9 -3.7 70.2 77.8 11.9
 ASP-217   VAL-218  9.6 10.2 17.8 -7.4 114.8 109.4 -23.3
 VAL-218   ASP-219  9.3 9.7 -5.4 10.8 123.5 130.7 34.9
 ASP-219   HIS-220  10.7 11.2 -4.7 -19.1 130.4 129.9 -68.6
 HIS-220   GLU-221  7.8 8.4 20.0 4.9 116.5 111.1 22.2
 GLU-221   ALA-222  5.2 5.5 -2.2 1.4 70.0 71.0 30.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-271   ASN-272  5.6 6.0 -3.9 16.6 27.6 26.7 -56.0
 ASN-272   VAL-273  7.8 8.4 0.7 2.8 124.2 125.9 62.7
 VAL-273   ILE-274  6.5 6.8 -0.5 -4.7 32.4 33.1 5.3
 ILE-274   LYS-275  9.5 9.7 -16.0 10.2 57.0 47.3 35.7
 LYS-275   PHE-276  8.4 8.2 -42.1 29.2 52.1 46.3 31.9
 PHE-276   GLN-277  10.9 11.0 5.9 -3.9 156.5 154.8 -11.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-591   ARG-592  10.0 10.1 13.3 -2.2 68.4 63.8 38.2
 ARG-592   LEU-593  8.2 8.4 2.4 -1.0 133.8 130.6 -13.9
 LEU-593   SER-594  7.3 7.0 14.2 -3.1 105.3 99.1 -52.7
 SER-594   ASP-595  5.1 4.6 -0.7 -3.3 115.3 110.1 2.8
 ASP-595   LEU-596  2.5 1.9 -0.6 1.5 57.1 47.3 14.2
 LEU-596   LEU-597  3.2 3.2 1.5 -17.8 135.9 136.5 73.0
 LEU-597   ASP-598  0.4 0.5 18.0 -11.4 72.7 67.8 24.1
 ASP-598   TRP-599  2.6 2.6 -11.5 4.6 72.8 71.2 9.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees