Methylcitrate Synthase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-193   VAL-194  8.4 8.6 -7.9 7.5 39.7 38.0 -58.4
 VAL-194   SER-195  8.5 8.6 6.0 -13.9 140.4 140.7 155.9
 SER-195   ALA-196  8.8 8.7 3.0 4.5 85.5 84.7 -88.9
 ALA-196   PHE-197  6.8 6.8 -1.8 -0.7 95.5 95.4 -17.9
 ALA-196   PHE-197  6.8 6.8 -1.8 -0.7 95.5 95.4 -17.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-196   PHE-197  6.8 6.8 -1.8 -0.7 95.5 95.4 -17.9
 ALA-196   PHE-197  6.8 6.8 -1.8 -0.7 95.5 95.4 -17.9
 PHE-197   GLU-198  3.6 3.5 2.7 -0.9 16.2 14.7 33.6
 GLU-198   GLN-199  4.2 4.2 -0.4 -1.6 122.0 122.3 -3.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-241   HIS-242  19.5 20.1 6.3 -6.7 139.8 140.0 77.3
 HIS-242   GLY-243  16.5 17.1 27.7 -15.2 60.0 66.7 49.3
 GLY-243   GLY-244  13.1 13.7 8.9 -1.4 2.0 16.8 280.9
 GLY-244   ALA-245  14.2 14.3 -14.0 17.5 111.4 103.5 -178.5
 ALA-245   ASN-246  14.3 14.0 -9.6 12.7 108.0 111.6 -35.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-263   GLU-264  25.2 25.3 -12.2 13.8 64.0 63.8 -46.2
 GLU-264   TRP-265  26.0 25.9 8.5 -7.6 76.8 77.2 -66.3
 TRP-265   LEU-266  23.2 23.1 5.4 -7.9 27.7 36.7 86.2
 LEU-266   ARG-267  24.3 24.5 20.7 2.6 87.8 91.8 52.5
 ARG-267   ALA-268  28.0 28.1 -12.0 -3.7 70.3 78.8 -36.2
 ALA-268   LYS-269  27.7 27.5 26.2 -27.4 49.3 48.8 125.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-276   MET-277  21.3 21.6 19.5 -23.3 122.7 122.5 211.8
 MET-277   GLY-278  17.8 18.0 -3.8 -8.0 67.9 65.9 263.4
 GLY-278   PHE-279  16.1 16.1 37.9 -12.6 122.9 115.8 -354.1
 PHE-279   GLY-280  19.4 19.2 -6.7 -46.4 57.5 38.4 1066.1
 GLY-280   HIS-281  21.2 20.5 47.9 -1.9 135.6 115.6 -992.0
 HIS-281   ARG-282  20.1 20.1 12.3 4.8 134.0 122.9 -76.9
 ARG-282   VAL-283  21.8 21.8 -3.6 8.9 34.5 29.7 -64.6
 VAL-283   TYR-284  20.5 20.2 -13.4 5.8 99.3 99.4 -84.2
 TYR-284   ARG-285  20.0 19.7 -4.6 7.8 116.8 115.9 124.8
 ARG-285   HIS-286  23.4 23.2 -11.4 25.2 106.8 101.4 76.3
 HIS-286   GLY-287  23.0 22.9 -15.2 5.1 107.9 117.4 -138.2
 GLY-287   ASP-288  19.7 19.8 16.2 -12.1 114.3 106.0 -141.1
 ASP-288   SER-289  16.2 16.0 1.7 -18.7 116.3 111.0 103.2
 SER-289   ARG-290  14.2 14.3 1.3 15.5 60.8 61.6 178.3
 SER-289   ARG-290  14.2 14.3 1.3 15.5 60.8 61.6 178.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-289   ARG-290  14.2 14.3 1.3 15.5 60.8 61.6 178.3
 SER-289   ARG-290  14.2 14.3 1.3 15.5 60.8 61.6 178.3
 ARG-290   VAL-291  11.2 11.2 0.1 2.1 30.4 30.5 18.5
 VAL-291   PRO-292  13.0 13.1 -3.5 -0.6 96.5 98.3 -50.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-294   LYS-295  9.7 9.7 1.5 -0.5 142.2 141.8 14.6
 LYS-295   ARG-296  12.8 12.9 1.5 -5.0 95.2 98.3 -39.6
 ARG-296   ALA-297  13.6 13.6 -2.8 7.4 66.8 68.1 -72.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-301   GLY-302  10.2 10.4 -8.1 8.4 151.1 153.2 -2.4
 GLY-302   THR-303  12.0 11.9 2.7 -13.5 66.6 64.1 -83.6
 THR-303   VAL-304  15.1 14.9 15.5 -3.1 66.0 76.7 139.2
 VAL-304   ARG-305  13.6 13.4 -10.6 3.4 133.0 134.9 -54.9
 ARG-305   ASP-306  10.5 10.4 11.5 -6.0 44.5 44.6 98.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-315   VAL-316  19.8 20.1 13.6 -10.3 108.5 111.7 50.5
 VAL-316   LEU-317  21.9 22.1 1.5 -13.1 71.0 72.8 -118.7
 LEU-317   ALA-318  20.7 21.1 32.3 -1.9 16.3 12.6 794.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-326   ILE-327  28.0 27.9 13.0 -3.8 110.9 112.4 -197.4
 ILE-327   LEU-328  24.6 24.6 -11.0 7.0 102.7 107.5 -247.4
 LEU-328   PRO-329  21.4 21.7 5.0 -2.9 75.1 70.3 -17.0
 PRO-329   ASN-330  17.9 18.2 -17.8 1.7 36.1 41.6 374.6
 ASN-330   LEU-331  15.4 15.5 6.1 -8.6 73.0 72.8 -29.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-344   ASP-345  2.3 2.3 -8.9 11.7 47.1 46.8 38.8
 ASP-345   ILE-346  4.6 4.7 3.6 -11.5 63.5 57.1 -54.7
 ILE-346   ALA-347  6.5 6.6 1.7 1.8 60.9 61.8 52.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees