Bone Morphogenetic Protein-2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-540   PHE-541  6.1 6.4 8.7 -4.8 28.3 28.9 33.7
 PHE-541   TYR-542  5.8 6.1 -0.1 1.2 110.1 111.1 5.9
 TYR-542   CYS-543  4.2 4.6 14.9 -16.1 31.8 33.9 -12.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-581   THR-582  3.5 3.5 -14.6 5.8 97.0 101.7 -13.2
 THR-582   GLU-583  6.6 6.3 5.3 2.8 32.6 36.4 60.2
 GLU-583   LEU-584  6.2 5.6 -9.2 8.3 119.5 120.9 4.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-608   GLU-609  1.6 1.4 7.5 -19.0 82.1 80.6 -8.9
 GLU-609   GLY-610  5.1 4.6 22.5 -12.1 20.3 31.3 75.5
 GLY-610   CYS-611  5.2 4.7 -11.7 2.3 117.4 116.3 -51.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees