Phospholipid-Transporting Atpase Dnf1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-676   MET-677  2.2 2.3 2.6 19.4 40.0 41.9 76.2
 MET-677   GLU-678  1.1 1.1 -17.0 13.9 99.8 86.7 -31.2
 GLU-678   PHE-679  4.2 3.9 42.2 -25.8 51.5 46.2 53.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-963   GLU-964  4.9 5.4 0.3 -55.6 112.3 118.2 88.7
 GLU-964   ASP-965  1.7 1.8 10.5 18.6 50.6 48.3 60.0
 ASP-965   ARG-966  2.0 1.8 23.7 8.1 109.4 116.2 -71.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees