Lysozyme (E.C.3.2.1.17)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ASN-2   ILE-3  6.9 8.6 10.3 -16.2 107.4 82.7 54.8
 ILE-3   PHE-4  3.4 5.4 -9.9 -9.8 11.7 38.8 40.5
 PHE-4   GLU-5  3.6 4.0 18.1 -11.3 108.7 114.6 86.3
 GLU-5   ILE-6  5.3 5.7 -8.2 0.3 109.5 118.8 -51.4
 ILE-6   LEU-7  4.6 5.6 20.1 -20.3 121.0 102.8 -28.3
 LEU-7   ARG-8  2.4 2.6 -4.1 17.1 12.2 13.5 -46.8
 ARG-8   ILE-9  2.8 2.9 -3.7 -1.9 87.2 85.9 23.8
 ILE-9   ASP-10  6.4 6.6 -24.9 29.3 101.1 110.2 8.5
 ASP-10   GLU-11  6.9 7.1 -17.0 18.6 51.0 59.3 -75.1
 GLU-11   GLY-12  6.1 5.9 -25.4 15.9 8.1 4.5 86.7
 GLY-12   LEU-13  5.3 5.0 -19.3 23.9 69.6 67.9 4.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ASP-72   ALA-73  10.1 10.1 -5.5 4.7 115.8 108.3 19.4
 ALA-73   ALA-74  11.8 11.9 2.4 -7.2 51.5 55.5 -26.4
 ALA-74   VAL-75  8.9 9.1 30.1 -21.2 28.8 21.0 40.7
 VAL-75   ARG-76  8.2 8.4 1.3 4.3 61.6 56.6 -8.7
 ARG-76   GLY-77  11.9 12.1 -6.0 -7.9 112.3 105.1 -41.4
 GLY-77   ILE-78  12.0 12.7 26.0 -10.6 23.9 39.7 75.3
 ILE-78   LEU-79  9.4 9.8 2.4 -8.2 43.5 25.5 -20.0
 LEU-79   ARG-80  10.8 10.8 14.6 -9.4 66.8 71.2 29.6
 ARG-80   ASN-81  14.2 14.2 4.2 6.0 63.1 74.1 27.4
 ASN-81   ALA-82  13.2 13.3 -13.5 12.9 155.0 160.6 -15.5
 ALA-82   LYS-83  13.2 13.8 -11.1 2.7 103.3 98.9 -24.2
 LYS-83   LEU-84  11.5 12.3 7.1 -15.4 114.8 116.7 -12.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees